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- America's dairyland
this is harder to tell the difference on a three cylinder than a six cylinder, unless the cylinder is completely dead, but I don't think the cylinder has lost enough power to notice easily.Try slacking off the fuel pipes at each injector in turn while it is running to see if you can identify a faulty injector or cylinder.
Sure seems like the air was not the issue if it's gone and the problem remains.
What temp is the engine? how long has it ran or worked hard since the cold day the problem started? The video looks like there could be some wax remaining just as the bubbles clear. If the fuel waxed out when it was cold, and it hasn't been run up to operating temp to get the fuel warmed, then the wax can remain even at higher temps than it takes to form. Wax might drop out of fuel at 10F but not melt back into the fuel until 50F, just guesses, not exact numbers.
Have you confirmed fuel pressure when it's misfiring? or just idling? The other issue the injectors you cleaned, could have been a simple temporary problem, and now there's an injector problem we wouldn't expect.